Building Your Own Cell Browser

Want to create a Cell Browser for your own single-cell dataset and host it on your own web server? The guides below walk through installing the software, importing data from common pipelines, annotating genes, converting and combining files, and configuring the result.

• Installation
• Quick Start Guide
• Setup your own
• Putting it onto the internet
• With text files
• With Seurat
• With Scanpy
• With Cell Ranger
• How To…
• Advanced Topics
• Annotate Genes
• cbTool: combine and convert your data
• Microscopy images
• Describing datasets
• Dataset Hierarchies
• Showing one dataset in more than one collection
• Configuring cellbrowser.conf